Aside

Hédia Tnani

Contact Info

SKILLS

R tidyverse

ggplot

Python Shell

Git GitHub

Docker aws

LANGUAGES

Arabic, French: Native

English: Proficient

Spanish: Proficient

Disclaimer

Last updated on 2021-04-28

Main

Hédia Tnani

Education

PhD in Biotechnology

Centre for Research in Agricultural Genomics (CRAG)

Barcelona, Spain

2007 - 2012

Research Projects

PostDoctoral Fellow

Pasteur Institute of Tunis (IPT). Laboratory of Bioinformatics, Biomathematics and Biostatistics (BIMS)

Tunis, Tunisia

2018 - Currently

  • Drug discovery: Study of gene expression during infection to understand the Host-Pathogen interaction of L.major and Network Propagation analysis
  • Identification of novel drug targets in Leishmania major using in-silico metabolic coupling
  • Part of the H3ABioNet Workflows, Machine Learning, RefGraph, Gene Association WPs
  • Development of Shell, R and Python pipelines for bioinformatics data analysis
  • Cloud computing using AWS
  • Nextflow pipeline for Variant Calling analysis and RNA-seq
  • Continuous Integration of the bioinformatic workflows

PostDoctoral Fellow

International Rice Research Institute (IRRI)

Los Baños, Philippines

2013 - 2017

  • Project manager of a BMZ project on developing flood tolerant rice varieties

PostDoctoral Fellow

National Centre of Scientific Research (CNRS)

Rouen, France

2012 - 2013

  • Project manager of the research aspect of an Interreg project between France (CNRS / University of Rouen) and England (University of Portsmouth)

Selected Publications in Journals

Enriched-GWAS and Transcriptome Analysis to Refine and Characterize a Major QTL for Anaerobic Germination Tolerance in Rice

N/A

Int. J. Mol. Sci. 2021, 22, 4445

2021

  • Tnani H, Chebotarov D, Thapa R, Ignacio JCI, Israel WK, Quilloy FA, Dixit S, Septiningsih EM, Kretzschmar T